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ado
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Alzheimer's Disease Ontology
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Alzheimer's Disease Ontology is a knowledge-based ontology that encompasses varieties of concepts related to Alzheimer'S Disease, structu...
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agro
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Agronomy Ontology
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Ontology of agronomic practices, agronomic techniques, and agronomic variables used in agronomic experiments
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aism
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Ontology for the Anatomy of the Insect SkeletoMuscular system (AISM)
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The AISM contains terms used in insect biodiversity research for describing structures of the exoskeleton and the skeletomuscular system....
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amphx
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The Amphioxus Development and Anatomy Ontology
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An ontology for the development and anatomy of Amphioxus (Branchiostoma lanceolatum).
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apo
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Ascomycete phenotype ontology
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A structured controlled vocabulary for the phenotypes of Ascomycete fungi
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apollo_sv
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Apollo Structured Vocabulary
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An OWL2 ontology of phenomena in infectious disease epidemiology and population biology for use in epidemic simulation.
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aro
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Antibiotic Resistance Ontology
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Antibiotic resistance genes and mutations
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bco
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Biological Collections Ontology
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An ontology to support the interoperability of biodiversity data, including data on museum collections, environmental/metagenomic samples...
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bfo
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Basic Formal Ontology
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The upper level ontology upon which OBO Foundry ontologies are built.
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bspo
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Biological Spatial Ontology
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An ontology for representing spatial concepts, anatomical axes, gradients, regions, planes, sides, and surfaces
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bto
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BRENDA tissue / enzyme source
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A structured controlled vocabulary for the source of an enzyme comprising tissues, cell lines, cell types and cell cultures.
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caro
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Common Anatomy Reference Ontology
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An upper level ontology to facilitate interoperability between existing anatomy ontologies for different species
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cdao
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Comparative Data Analysis Ontology
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a formalization of concepts and relations relevant to evolutionary comparative analysis
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cdno
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Compositional Dietary Nutrition Ontology
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CDNO provides structured terminologies to describe nutritional attributes of material entities that contribute to human diet.
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chebi
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Chemical Entities of Biological Interest
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A structured classification of molecular entities of biological interest focusing on 'small' chemical compounds.
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cheminf
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Chemical Information Ontology
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Includes terms for the descriptors commonly used in cheminformatics software applications and the algorithms which generate them.
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chiro
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CHEBI Integrated Role Ontology
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CHEBI provides a distinct role hierarchy. Chemicals in the structural hierarchy are connected via a 'has role' relation. CHIRO provides l...
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chmo
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Chemical Methods Ontology
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CHMO, the chemical methods ontology, describes methods used to
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cido
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Coronavirus Infectious Disease Ontology
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The Coronavirus Infectious Disease Ontology (CIDO) aims to ontologically represent and standardize various aspects of coronavirus infecti...
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cio
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Confidence Information Ontology
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An ontology to capture confidence information about annotations.
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cl
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Cell Ontology
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The Cell Ontology is a structured controlled vocabulary for cell types in animals.
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clao
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Collembola Anatomy Ontology
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CLAO is an ontology of anatomical terms employed in morphological descriptions for the Class Collembola (Arthropoda: Hexapoda).
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clo
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Cell Line Ontology
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An ontology to standardize and integrate cell line information and to support computer-assisted reasoning.
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clyh
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Clytia hemisphaerica Development and Anatomy Ontology
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The Clytia hemisphaerica Development and Anatomy Ontology (CLYH) describes the anatomical and developmental features of the Clytia hemisp...
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cmo
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Clinical measurement ontology
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Morphological and physiological measurement records generated from clinical and model organism research and health programs.
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cob
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Core Ontology for Biology and Biomedicine
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COB brings together key terms from a wide range of OBO projects to improve interoperability.
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colao
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Coleoptera Anatomy Ontology (COLAO)
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The Coleoptera Anatomy Ontology contains terms used for describing the anatomy and phenotype of beetles in biodiversity research. It has ...
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cro
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Contributor Role Ontology
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A classification of the diverse roles performed in the work leading to a published research output in the sciences. Its purpose to provid...
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cteno
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Ctenophore Ontology
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An anatomical and developmental ontology for ctenophores (Comb Jellies)
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cto
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CTO: Core Ontology of Clinical Trials
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The core Ontology of Clinical Trials (CTO) will serve as a structured resource integrating basic terms and concepts in the context of cli...
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cvdo
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Cardiovascular Disease Ontology
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An ontology to describe entities related to cardiovascular diseases
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ddanat
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Dictyostelium discoideum anatomy
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A structured controlled vocabulary of the anatomy of the slime-mold Dictyostelium discoideum
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ddpheno
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Dictyostelium discoideum phenotype ontology
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A structured controlled vocabulary of phenotypes of the slime-mould Dictyostelium discoideum.
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dideo
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Drug-drug Interaction and Drug-drug Interaction Evidence Ontology
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The Potential Drug-drug Interaction and Potential Drug-drug Interaction Evidence Ontology
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disdriv
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Disease Drivers Ontology
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Ontology for drivers and triggers of human diseases, built to classify ExO ontology exposure stressors. An application ontology. Built in...
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doid
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Human Disease Ontology
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An ontology for describing the classification of human diseases organized by etiology.
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dpo
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Drosophila Phenotype Ontology
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An ontology of commonly encountered and/or high level Drosophila phenotypes.
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dron
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The Drug Ontology
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An ontology to support comparative effectiveness researchers studying claims data.
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duo
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Data Use Ontology
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DUO is an ontology which represent data use conditions.
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ecao
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The Echinoderm Anatomy and Development Ontology
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An ontology for the development and anatomy of the different species of the phylum Echinodermata (NCBITaxon:7586).
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eco
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Evidence ontology
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An ontology for experimental and other evidence statements.
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ecocore
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An ontology of core ecological entities
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Ecocore is a community ontology for the concise and controlled description of ecological traits of organisms.
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ecto
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Environmental conditions, treatments and exposures ontology
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ECTO describes exposures to experimental treatments of plants and model organisms (e.g. exposures to modification of diet, lighting level...
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emapa
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Mouse Developmental Anatomy Ontology
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An ontology for mouse anatomy covering embryonic development and postnatal stages.
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envo
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Environment Ontology
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An ontology of environmental systems, components, and processes.
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epio
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Epilepsy Ontology
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A application driven Epilepsy Ontology with official terms from the ILAE.
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eupath
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VEuPathDB ontology
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An ontology is developed to support Eukaryotic Pathogen, Host & Vector Genomics Resource (VEuPathDB; https://veupathdb.org).
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exo
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Exposure ontology
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Vocabularies for describing exposure data to inform understanding of environmental health.
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fao
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Fungal gross anatomy
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A structured controlled vocabulary for the anatomy of fungi.
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fbbt
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Drosophila gross anatomy
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An ontology representing the gross anatomy of Drosophila melanogaster.
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fbcv
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FlyBase Controlled Vocabulary
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A structured controlled vocabulary used for various aspects of annotation by FlyBase.
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fbdv
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Drosophila development
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A structured controlled vocabulary of the development of Drosophila melanogaster.
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fideo
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Food Interactions with Drugs Evidence Ontology
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Food-Drug interactions automatically extracted from scientific literature
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flopo
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Flora Phenotype Ontology
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Traits and phenotypes of flowering plants occurring in digitized Floras
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fobi
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Food-Biomarker Ontology
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FOBI (Food-Biomarker Ontology) is an ontology to represent food intake data and associate it with metabolomic data
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foodon
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Food Ontology
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A broadly scoped ontology representing entities which bear a “food role”. It encompasses materials in natural ecosystems and agriculture ...
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fovt
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FuTRES Ontology of Vertebrate Traits
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FuTRES Ontology of Vertebrate Traits is an application ontology used to convert vertebrate trait data in spreadsheet to triples. FOVT lev...
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fypo
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Fission Yeast Phenotype Ontology
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FYPO is a formal ontology of phenotypes observed in fission yeast.
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gecko
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Genomics Cohorts Knowledge Ontology
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An ontology to represent genomics cohort attributes
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genepio
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Genomic Epidemiology Ontology
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The Genomic Epidemiology Ontology (GenEpiO) covers vocabulary necessary to identify, document and research foodborne pathogens and associ...
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geno
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Genotype Ontology
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An integrated ontology for representing the genetic variations described in genotypes, and their causal relationships to phenotype and di...
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geo
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Geographical Entity Ontology
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An ontology of geographical entities
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gno
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Glycan Naming and Subsumption Ontology (GNOme)
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GlyTouCan provides stable accessions for glycans described at varyious degrees of characterization, including compositions (no linkage) a...
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go
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Gene Ontology
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An ontology for describing the function of genes and gene products
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hancestro
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Human Ancestry Ontology
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The Human Ancestry Ontology (HANCESTRO) provides a systematic description of the ancestry concepts used in the NHGRI-EBI Catalog of publi...
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hao
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Hymenoptera Anatomy Ontology
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A structured controlled vocabulary of the anatomy of the Hymenoptera (bees, wasps, and ants)
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hom
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Homology Ontology
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This ontology represents concepts related to homology, as well as other concepts used to describe similarity and non-homology.
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hsapdv
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Human Developmental Stages
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Life cycle stages for Human
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hso
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Health Surveillance Ontology
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The health Surveillance Ontology (HSO) focuses on "surveillance system level data", that is, data outputs from surveillance activities, s...
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htn
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Hypertension Ontology
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An ontology for representing clinical data about hypertension, intended to support classification of patients according to various diagno...
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iao
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Information Artifact Ontology
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An ontology of information entities.
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iceo
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Integrative and Conjugative Element Ontology
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ICEO is an integrated biological ontology for the description of bacterial integrative and conjugative elements (ICEs).
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ico
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Informed Consent Ontology
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An ontology of clinical informed consents
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ido
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Infectious Disease Ontology
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A set of interoperable ontologies that will together provide coverage of the infectious disease domain. IDO core is the upper-level ontol...
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ino
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Interaction Network Ontology
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An ontology of interactions and interaction networks
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labo
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clinical LABoratory Ontology
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LABO is an ontology of informational entities formalizing clinical laboratory tests prescriptions and reporting documents.
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lepao
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Lepidoptera Anatomy Ontology
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The Lepidoptera Anatomy Ontology contains terms used for describing the anatomy and phenotype of moths and butterflies in biodiversity re...
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ma
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Mouse adult gross anatomy
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A structured controlled vocabulary of the adult anatomy of the mouse (Mus).
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maxo
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Medical Action Ontology
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The Medical Action Ontology (MAxO) provides a broad view of medical actions and includes terms for medical procedures, interventions, the...
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mco
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Microbial Conditions Ontology
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Microbial Conditions Ontology is an ontology...
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mcro
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Model Card Report Ontology
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An ontology representing the structure of model card reports - reports that describe basic characteristics of machine learning models for...
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mf
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Mental Functioning Ontology
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The Mental Functioning Ontology is an overarching ontology for all aspects of mental functioning.
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mfoem
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Emotion Ontology
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An ontology of affective phenomena such as emotions, moods, appraisals and subjective feelings.
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mfomd
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Mental Disease Ontology
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An ontology to describe and classify mental diseases such as schizophrenia, annotated with DSM-IV and ICD codes where applicable
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mi
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Molecular Interactions Controlled Vocabulary
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A structured controlled vocabulary for the annotation of experiments concerned with protein-protein interactions.
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miapa
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MIAPA Ontology
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An application ontology to formalize annotation of phylogenetic data.
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mmo
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Measurement method ontology
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A representation of the variety of methods used to make clinical and phenotype measurements.
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mmusdv
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Mouse Developmental Stages
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Life cycle stages for Mus Musculus
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mod
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Protein modification
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PSI-MOD is an ontology consisting of terms that describe protein chemical modifications
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mondo
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Mondo Disease Ontology
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A global community effort to harmonize multiple disease resources to yield a coherent merged ontology.
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mop
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Molecular Process Ontology
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Processes at the molecular level
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mp
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Mammalian Phenotype Ontology
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Standard terms for annotating mammalian phenotypic data.
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mpath
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Mouse pathology ontology
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A structured controlled vocabulary of mutant and transgenic mouse pathology phenotypes
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mpio
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Minimum PDDI Information Ontology
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An ontology of minimum information regarding potential drug-drug interaction information.
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mro
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MHC Restriction Ontology
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An ontology for Major Histocompatibility Complex (MHC) restriction in experiments
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ms
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Mass spectrometry ontology
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A structured controlled vocabulary for the annotation of experiments concerned with proteomics mass spectrometry.
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nbo
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Neuro Behavior Ontology
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An ontology of human and animal behaviours and behavioural phenotypes
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ncbitaxon
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NCBI organismal classification
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An ontology representation of the NCBI organismal taxonomy
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ncit
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NCI Thesaurus OBO Edition
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NCI Thesaurus (NCIt)is a reference terminology that includes broad coverage of the cancer domain, including cancer related diseases, find...
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ncro
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Non-Coding RNA Ontology
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An ontology for non-coding RNA, both of biological origin, and engineered.
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ngbo
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Next Generation Biobanking Ontology
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The Next Generation Biobanking Ontology (NGBO) is an open application ontology representing contextual data about omics digital assets in...
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nomen
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NOMEN - A nomenclatural ontology for biological names
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NOMEN is a nomenclatural ontology for biological names (not concepts). It encodes the goverened rules of nomenclature.
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oae
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Ontology of Adverse Events
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A biomedical ontology in the domain of adverse events
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oarcs
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Ontology of Arthropod Circulatory Systems
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OArCS is an ontology describing the Arthropod ciruclatory system.
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oba
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Ontology of Biological Attributes
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A collection of biological attributes (traits) covering all kingdoms of life.
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obcs
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Ontology of Biological and Clinical Statistics
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A biomedical ontology in the domain of biological and clinical statistics.
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obi
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Ontology for Biomedical Investigations
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An integrated ontology for the description of life-science and clinical investigations
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obib
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Ontology for Biobanking
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An ontology built for annotation and modeling of biobank repository and biobanking administration
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ogg
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The Ontology of Genes and Genomes
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A formal ontology of genes and genomes of biological organisms.
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ogms
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Ontology for General Medical Science
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An ontology for representing treatment of disease and diagnosis and on carcinomas and other pathological entities
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ohd
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Oral Health and Disease Ontology
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The Oral Health and Disease Ontology is used for representing the diagnosis and treatment of dental maladies.
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ohmi
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Ontology of Host-Microbiome Interactions
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The Ontology of Host-Microbiome Interactions aims to ontologically represent and standardize various entities and relations related to mi...
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ohpi
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Ontology of Host Pathogen Interactions
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OHPI is a community-driven ontology of host-pathogen interactions (OHPI) and represents the virulence factors (VFs) and how the mutants o...
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omit
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Ontology for MIRNA Target
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Ontology to establish data exchange standards and common data elements in the microRNA (miR) domain
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omo
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OBO Metadata Ontology
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An ontology specifies terms that are used to annotate ontology terms for all OBO ontologies. The ontology was developed as part of Inform...
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omp
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Ontology of Microbial Phenotypes
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An ontology of phenotypes covering microbes
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omrse
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Ontology for Modeling and Representation of Social Entities
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The Ontology for Modeling and Representation of Social Entities (OMRSE) is an OBO Foundry ontology that represents the various entities t...
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one
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Ontology for Nutritional Epidemiology
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An ontology to standardize research output of nutritional epidemiologic studies.
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ons
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Ontology for Nutritional Studies
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An ontology for description of concepts in the nutritional studies domain.
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ontoavida
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OntoAvida: ontology for Avida digital evolution platform
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OntoAvida develops an integrated vocabulary for the description of the most widely-used computational approach for studying evolution usi...
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ontoneo
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Obstetric and Neonatal Ontology
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The Obstetric and Neonatal Ontology is a structured controlled vocabulary to provide a representation of the data from electronic health ...
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oostt
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Ontology of Organizational Structures of Trauma centers and Trauma systems
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An ontology built for representating the organizational components of trauma centers and trauma systems.
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opl
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Ontology for Parasite LifeCycle
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A reference ontology for parasite life cycle stages.
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opmi
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Ontology of Precision Medicine and Investigation
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The Ontology of Precision Medicine and Investigation (OPMI) aims to ontologically represent and standardize various entities and relation...
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ornaseq
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Ontology of RNA Sequencing
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An application ontology designed to annotate next-generation sequencing experiments performed on RNA.
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ovae
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Ontology of Vaccine Adverse Events
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A biomedical ontology in the domain of vaccine adverse events.
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pato
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Phenotype And Trait Ontology
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An ontology of phenotypic qualities (properties, attributes or characteristics)
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pcl
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Provisional Cell Ontology
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Cell types that are provisionally defined by experimental techniques such as single cell or single nucleus transcriptomics rather than a ...
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pco
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Population and Community Ontology
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An ontology about groups of interacting organisms such as populations and communities
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pdro
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The Prescription of Drugs Ontology
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An ontology to describe entities related to prescription of drugs
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peco
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Plant Experimental Conditions Ontology
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A structured, controlled vocabulary which describes the treatments, growing conditions, and/or study types used in plant biology experime...
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phipo
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Pathogen Host Interaction Phenotype Ontology
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PHIPO is a formal ontology of species-neutral phenotypes observed in pathogen-host interactions.
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plana
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planaria-ontology
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PLANA, the planarian anatomy ontology, encompasses the anatomy and life cycle stages for both __Schmidtea mediterranea__ biotypes.
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planp
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Planarian Phenotype Ontology
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Planarian Phenotype Ontology is an ontology of phenotypes observed in the planarian Schmidtea mediterranea.
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po
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Plant Ontology
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The Plant Ontology is a structured vocabulary and database resource that links plant anatomy, morphology and growth and development to pl...
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poro
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Porifera Ontology
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An ontology covering the anatomy of the taxon Porifera (sponges)
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ppo
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Plant Phenology Ontology
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An ontology for describing the phenology of individual plants and populations of plants, and for integrating plant phenological data acro...
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pr
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PRotein Ontology (PRO)
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An ontological representation of protein-related entities
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proco
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Process Chemistry Ontology
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PROCO covers process chemistry, the chemical field concerned with scaling up laboratory syntheses to commercially viable processes.
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psdo
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Performance Summary Display Ontology
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Ontology to reproducibly study visualizations of clinical performance
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pso
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Plant Stress Ontology
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The Plant Stress Ontology describes biotic and abiotic stresses that a plant may encounter.
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pw
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Pathway ontology
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A controlled vocabulary for annotating gene products to pathways.
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rbo
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Radiation Biology Ontology
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RBO is an ontology for the effects of radiation on biota in terrestrial and space environments.
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ro
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Relation Ontology
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Relationship types shared across multiple ontologies
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rs
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Rat Strain Ontology
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Ontology of rat strains
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rxno
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Name Reaction Ontology
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Connects organic name reactions to their roles in an organic synthesis and to processes in MOP
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sepio
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Scientific Evidence and Provenance Information Ontology
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An ontology for representing the provenance of scientific claims and the evidence that supports them.
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so
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Sequence types and features ontology
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A structured controlled vocabulary for sequence annotation, for the exchange of annotation data and for the description of sequence objec...
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spd
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Spider Ontology
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An ontology for spider comparative biology including anatomical parts (e.g. leg, claw), behavior (e.g. courtship, combing) and products (...
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stato
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The Statistical Methods Ontology
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STATO is a general-purpose STATistics Ontology. Its aim is to provide coverage for processes such as statistical tests, their conditions ...
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swo
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Software ontology
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The Software Ontology (SWO) is a resource for describing software tools, their types, tasks, versions, provenance and associated data. It...
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symp
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Symptom Ontology
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An ontology of disease symptoms, with symptoms encompasing perceived changes in function, sensations or appearance reported by a patient ...
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t4fs
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terms4FAIRskills
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A terminology for the skills necessary to make data FAIR and to keep it FAIR.
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taxrank
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Taxonomic rank vocabulary
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A vocabulary of taxonomic ranks (species, family, phylum, etc)
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to
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Plant Trait Ontology
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A controlled vocabulary to describe phenotypic traits in plants.
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trans
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Pathogen Transmission Ontology
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An ontology representing the disease transmission process during which the pathogen is transmitted directly or indirectly from its natura...
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tto
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Teleost taxonomy ontology
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An ontology covering the taxonomy of teleosts (bony fish)
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txpo
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Toxic Process Ontology
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TOXic Process Ontology (TXPO) systematizes a wide variety of terms involving toxicity courses and processes. The first version of TXPO fo...
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uberon
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Uberon multi-species anatomy ontology
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An integrated cross-species anatomy ontology covering animals and bridging multiple species-specific ontologies
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uo
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Units of measurement ontology
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Metrical units for use in conjunction with PATO
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upheno
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Unified phenotype ontology (uPheno)
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The uPheno ontology integrates multiple phenotype ontologies into a unified cross-species phenotype ontology.
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vbo
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Vertebrate Breed Ontology
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Vertebrate Breed Ontology is an ontology created to serve as a single computable resource for vertebrate breed names.
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vo
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Vaccine Ontology
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VO is a biomedical ontology in the domain of vaccine and vaccination.
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vt
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Vertebrate trait ontology
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An ontology of traits covering vertebrates
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vto
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Vertebrate Taxonomy Ontology
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Comprehensive hierarchy of extinct and extant vertebrate taxa.
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wbbt
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C. elegans Gross Anatomy Ontology
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A structured controlled vocabulary of the anatomy of Caenorhabditis elegans.
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wbls
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C. elegans development ontology
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A structured controlled vocabulary of the development of Caenorhabditis elegans.
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wbphenotype
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C. elegans phenotype
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A structured controlled vocabulary of Caenorhabditis elegans phenotypes
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xao
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Xenopus Anatomy Ontology
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XAO represents the anatomy and development of the African frogs Xenopus laevis and tropicalis.
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xco
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Experimental condition ontology
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Conditions under which physiological and morphological measurements are made both in the clinic and in studies involving humans or model ...
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xlmod
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HUPO-PSI cross-linking and derivatization reagents controlled vocabulary
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A structured controlled vocabulary for cross-linking reagents used with proteomics mass spectrometry.
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xpo
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Xenopus Phenotype Ontology
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XPO represents anatomical, cellular, and gene function phenotypes occurring throughout the development of the African frogs Xenopus laevi...
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zeco
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Zebrafish Experimental Conditions Ontology
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Experimental conditions applied to zebrafish, developed to facilitate experiment condition annotation at ZFIN
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zfa
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Zebrafish anatomy and development ontology
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A structured controlled vocabulary of the anatomy and development of the Zebrafish
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zfs
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Zebrafish developmental stages ontology
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Developmental stages of the Zebrafish
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zp
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Zebrafish Phenotype Ontology
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The Zebrafish Phenotype Ontology formally defines all phenotypes of the Zebrafish model organism.
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gsso
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Gender, Sex, and Sexual Orientation (GSSO) ontology
![Apache 2.0 License]()
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The Gender, Sex, and Sexual Orientation (GSSO) ontology has terms for annotating interdisciplinary information concerning gender, sex, an...
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hp
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Human Phenotype Ontology
![hpo]()
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A structured and controlled vocabulary for the phenotypic features encountered in human hereditary and other disease.
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kisao
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Kinetic Simulation Algorithm Ontology
![Artistic License 2.0]()
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A classification of algorithms for simulating biology, their parameters, and their outputs
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sbo
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Systems Biology Ontology
![Artistic License 2.0]()
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Terms commonly used in Systems Biology, and in particular in computational modeling.
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scdo
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Sickle Cell Disease Ontology
![GPL-3.0]()
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An ontology for the standardization of terminology and integration of knowledge about Sickle Cell Disease.
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fix
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Physico-chemical methods and properties
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An ontology of physico-chemical methods and properties.
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mamo
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Mathematical modeling ontology
![Artistic License 2.0]()
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The Mathematical Modelling Ontology (MAMO) is a classification of the types of mathematical models used mostly in the life sciences, thei...
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rex
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Physico-chemical process
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An ontology of physico-chemical processes, i.e. physico-chemical changes occurring in course of time.
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sibo
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Social Insect Behavior Ontology
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Social Behavior in insects
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vario
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Variation Ontology
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Variation Ontology, VariO, is an ontology for standardized, systematic description of effects, consequences and mechanisms of variations.
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fbbi
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Biological Imaging Methods Ontology
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A structured controlled vocabulary of sample preparation, visualization and imaging methods used in biomedical research.
inactive
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mfmo
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Mammalian Feeding Muscle Ontology
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The Mammalian Feeding Muscle Ontology is an antomy ontology for the muscles of the head and neck that participate in feeding, swallowing,...
inactive
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micro
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Ontology of Prokaryotic Phenotypic and Metabolic Characters
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An ontology of prokaryotic phenotypic and metabolic characters
inactive
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ogsf
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Ontology of Genetic Susceptibility Factor
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An application ontology to represent genetic susceptibility to a specific disease, adverse event, or a pathological process.
inactive
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olatdv
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Medaka Developmental Stages
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Life cycle stages for Medaka
inactive
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pdumdv
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Platynereis Developmental Stages
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Life cycle stages for Platynereis dumerilii
inactive
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aeo
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Anatomical Entity Ontology
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AEO is an ontology of anatomical structures that expands CARO, the Common Anatomy Reference Ontology
inactive
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ceph
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Cephalopod Ontology
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An anatomical and developmental ontology for cephalopods
inactive
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ehdaa2
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Human developmental anatomy, abstract
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A structured controlled vocabulary of stage-specific anatomical structures of the developing human.
inactive
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fma
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Foundational Model of Anatomy Ontology (subset)
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This is currently a slimmed down version of FMA
inactive
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gaz
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Gazetteer
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A gazetteer constructed on ontological principles. The countries are actively maintained.
inactive
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idomal
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Malaria Ontology
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An application ontology to cover all aspects of malaria as well as the intervention attempts to control it.
inactive
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miro
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Mosquito insecticide resistance
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Application ontology for entities related to insecticide resistance in mosquitos
inactive
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rnao
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RNA ontology
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Controlled vocabulary pertaining to RNA function and based on RNA sequences, secondary and three-dimensional structures.
inactive
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tads
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Tick Anatomy Ontology
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The anatomy of the Tick, Families: Ixodidae, Argassidae
inactive
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tgma
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Mosquito gross anatomy ontology
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A structured controlled vocabulary of the anatomy of mosquitoes.
inactive
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upa
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Unipathway
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A manually curated resource for the representation and annotation of metabolic pathways
inactive
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aao
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Amphibian gross anatomy
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obsolete
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adw
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Animal natural history and life history
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obsolete
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aero
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Adverse Event Reporting Ontology
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The Adverse Event Reporting Ontology (AERO) is an ontology aimed at supporting clinicians at the time of data entry, increasing quality a...
obsolete
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ato
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Amphibian taxonomy
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obsolete
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bcgo
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Beta Cell Genomics Ontology
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An application ontology built for beta cell genomics studies.
obsolete
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bila
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Bilateria anatomy
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obsolete
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bootstrep
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Gene Regulation Ontology
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obsolete
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cmf
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CranioMaxilloFacial ontology
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obsolete
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dc_cl
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Dendritic cell
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obsolete
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dinto
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The Drug-Drug Interactions Ontology
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A formal represention for drug-drug interactions knowledge.
obsolete
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ehda
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Human developmental anatomy, timed version
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obsolete
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ehdaa
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Human developmental anatomy, abstract version
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obsolete
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emap
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Mouse gross anatomy and development, timed
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A structured controlled vocabulary of stage-specific anatomical structures of the mouse (Mus).
obsolete
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eo
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Plant Environment Ontology
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A structured, controlled vocabulary which describes the treatments, growing conditions, and/or study types used in plant biology experime...
obsolete
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epo
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Epidemiology Ontology
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An ontology designed to support the semantic annotation of epidemiology resources
obsolete
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ero
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eagle-i resource ontology
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An ontology of research resources such as instruments. protocols, reagents, animal models and biospecimens.
obsolete
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ev
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eVOC (Expressed Sequence Annotation for Humans)
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obsolete
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fbsp
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Fly taxonomy
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The taxonomy of the family Drosophilidae (largely after Baechli) and of other taxa referred to in FlyBase.
obsolete
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flu
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Influenza Ontology
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obsolete
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gro
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Cereal Plant Gross Anatomy
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obsolete
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habronattus
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Habronattus courtship
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obsolete
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iev
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Event (INOH pathway ontology)
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obsolete
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imr
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Molecule role (INOH Protein name/family name ontology)
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obsolete
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ipr
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Protein Domains
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obsolete
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lipro
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Lipid Ontology
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An ontology representation of the LIPIDMAPS nomenclature classification.
obsolete
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loggerhead
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Loggerhead nesting
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obsolete
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mao
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Multiple alignment
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obsolete
Detail
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mat
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Minimal anatomical terminology
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obsolete
Detail
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mfo
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Medaka fish anatomy and development
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A structured controlled vocabulary of the anatomy and development of the Japanese medaka fish, Oryzias latipes.
obsolete
Detail
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mirnao
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microRNA Ontology
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An application ontology for use with miRNA databases.
obsolete
Detail
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mo
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Microarray experimental conditions
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A standardized description of a microarray experiment in support of MAGE v.1.
obsolete
Detail
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nif_cell
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NIF Cell
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Neuronal cell types
obsolete
Detail
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nif_dysfunction
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NIF Dysfunction
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obsolete
Detail
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nif_grossanatomy
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NIF Gross Anatomy
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obsolete
Detail
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nmr
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NMR-instrument specific component of metabolomics investigations
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Descriptors relevant to the experimental conditions of the Nuclear Magnetic Resonance (NMR) component in a metabolomics investigation.
obsolete
Detail
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obo_rel
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OBO relationship types (legacy)
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obsolete
Detail
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ogi
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Ontology for genetic interval
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An ontology that formalizes the genomic element by defining an upper class genetic interval
obsolete
Detail
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omiabis
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Ontologized MIABIS
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An ontological version of MIABIS (Minimum Information About BIobank data Sharing)
obsolete
Detail
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pao
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Plant Anatomy Ontology
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obsolete
Detail
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pd_st
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Platynereis stage ontology
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obsolete
Detail
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pgdso
|
Plant Growth and Development Stage
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obsolete
Detail
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plo
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Plasmodium life cycle
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obsolete
Detail
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propreo
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Proteomics data and process provenance
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obsolete
Detail
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resid
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Protein covalent bond
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For the description of covalent bonds in proteins.
obsolete
Detail
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sao
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Subcellular anatomy ontology
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obsolete
Detail
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sep
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Sample processing and separation techniques
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A structured controlled vocabulary for the annotation of sample processing and separation techniques in scientific experiments.
obsolete
Detail
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sopharm
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Suggested Ontology for Pharmacogenomics
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obsolete
Detail
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tahe
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Terminology of Anatomy of Human Embryology
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obsolete
Detail
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tahh
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Terminology of Anatomy of Human Histology
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obsolete
Detail
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tao
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Teleost Anatomy Ontology
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Multispecies fish anatomy ontology. Originally seeded from ZFA, but intended to cover terms relevant to other taxa
obsolete
Detail
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vhog
|
Vertebrate Homologous Ontology Group Ontology
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obsolete
Detail
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vsao
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Vertebrate Skeletal Anatomy Ontology-
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Vertebrate skeletal anatomy ontology.
obsolete
Detail
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ypo
|
Yeast phenotypes
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obsolete
Detail
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zea
|
Maize gross anatomy
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obsolete
Detail
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