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FAQ
C. elegans phenotype
A structured controlled vocabulary of
Caenorhabditis elegans
phenotypes
This ontology uses a mixed-case prefix. Identifiers and URIs should use: "WBPhenotype".
OntoBee
AberOWL
OLS
Bioregistry
Publications
Worm Phenotype Ontology: integrating phenotype data within and beyond the C. elegans community.
Products
wbphenotype.owl
wbphenotype.obo
wbphenotype/wbphenotype-base.owl
Usages
User
https://www.wormbase.org/
Description
WormBase uses WBPhenotype to curate worm phenotypes, and to allow search and indexing on the WormBase site
Type
annotation
Examples
Expression for daf-16 gene with WormBase ID WBGene00000912.
Publications
WormBase: a modern Model Organism Information Resource
User
https://monarchinitiative.org/
Description
Monarch integrates phenotype annotations from sources such as WormBase, and allows for querying using the WBPhenotype ontology.
Type
annotation
Examples
Egg long: The fertilized oocytes have a greater than standard length measured end to end compared to control.
Publications
The Monarch Initiative: an integrative data and analytic platform connecting phenotypes to genotypes across species
ID Space
wbphenotype
PURL
http://purl.obolibrary.org/obo/wbphenotype.owl
License
CC BY 4.0
Homepage
https://github.com/obophenotype/c-elegans-phenotype-ontology
Contact
Chris Grove
0000-0001-9076-6015
@chris-grove
Tracker
https://github.com/obophenotype/c-elegans-phenotype-ontology/issues
Domain
phenotype
Taxon
Caenorhabditis
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