Plant Environment Ontology
A structured, controlled vocabulary which describes the treatments, growing conditions, and/or study types used in plant biology experiments.
This ontology is deprecated!
Consider using: peco
OntoBee
AberOWL
OLS
Bioregistry
A structured, controlled vocabulary for the representation of plant environmental conditions.
Migration Guide from EO to PECO
If you are using classes like EO:nnnnnn then you should be able to substitute this for PECO:nnnnnn, as all of the numeric parts of the ID are preserved.
For a more robust mechanism, peco.obo contains alt_ids, and peco.owl contains the equivalent replaced_by assertions, which point from an obsoleted EO class to the corresponding PECO class.
If you have any issues you can report them here:
https://github.com/Planteome/plant-experimental-conditions-ontology/issues/95
Publications
Usages
- User
- http://planteome.org/
- Description
- Planteome uses EO to describe traits for genes and germplasm
- Examples
- Genes and proteins annotated to cold temperature regiment
- User
- http://gramene.org/
- Description
- Gramene uses EO for the annotation of plant genes and QTLs
- Examples
- Gramene annotations to cold temperature regiment
- ID Space
- eo
- PURL
- http://purl.obolibrary.org/obo/eo.owl
- License
- CC BY 4.0
- Homepage
- http://planteome.org/
- http://browser.planteome.org/amigo/term/EO:0007359
- Contact
- Pankaj Jaiswal
- 0000-0002-1005-8383
- @jaiswalp
- Repository
- https://github.com/Planteome/plant-environment-ontology
- Tracker
- https://github.com/Planteome/plant-environment-ontology/issues
- Domain
- environment
- Stars
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- Contributors
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- Last Commit
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- OBO Dashboard
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