Glycan Naming and Subsumption Ontology (GNOme)

GlyTouCan provides stable accessions for glycans described at varyious degrees of characterization, including compositions (no linkage) and topologies (no carbon bond positions or anomeric configurations). GNOme organizes these stable accessions for interative browsing, for text-based searching, and for automated reasoning with well-defined characterization levels.

Products

gno.owl Glycan Naming and Subsumption Ontology, OWL format (primary)
gno.obo Glycan Naming and Subsumption Ontology, OBO format (automated conversion from OWL)
gno.json Glycan Naming and Subsumption Ontology, JSON format (automated conversion from OWL)

Usages

User
https://www.glygen.org/
Description
GlyGen - Computational and Informatics Resources for Glycoscience
Examples
GNOme attributes and related glycans on glycan pages
User
https://proconsortium.org/
Description
PRO - Protein Ontology
Examples
example of PRO use of GNO terms
User
https://www.ebi.ac.uk/chebi/init.do
Description
ChEBI - Chemical Entities of Biological Interest
Examples
example of ChEBI use of GNO terms