Cell Line Ontology
An ontology to standardize and integrate cell line information and to support computer-assisted reasoning.
OntoBee
AberOWL
OLS
BioPortal
Bioregistry
Summary
The Cell Line Ontology (CLO) is a community-driven ontology that is developed to standardize and integrate cell line information and support computer-assisted reasoning.
Download
Use the following URI to download this ontology
- http://purl.obolibrary.org/obo/clo.owl
- This should point to: https://raw.githubusercontent.com/CLO-ontology/CLO/master/clo.owl
Browsing
- Default browsing in Ontobee: https://www.ontobee.org/ontology/clo
- Browsing in NCBO BioPortal: https://bioportal.bioontology.org/ontologies/CLO
Publications
Products
| clo.owl |
Usages
- User
- https://www.cellosaurus.org/
- Description
- Cellosaurus, a knowledge resource for cell lines, provides cross-references to CLO IDs.
- Examples
- Mouse 10B9 cell
- User
- https://pubchem.ncbi.nlm.nih.gov
- Description
- NIH PubChem records include cross-references to CLO IDs.
- Examples
- NCI-H226 (Cell)
- User
- https://lincsproject.org
- Description
- NIH LINCS project uses CLO for cell line annotation.
- Examples
- In LINCS cell line metadata, the field "CL_Alternative_ID" specifies the CLO.
- User
- https://www.iedb.org
- Description
- Immune Epitope Database uses CLO for annotation
- Examples
- In the 'USE OF ONTOLOGIES IN THE IEDB' section, "We continue to expand our use of ontologies for more fields, and have recently incorporated the MRO, Uberon, cell type and cell line ontologies".
- ID Space
- clo
- PURL
- http://purl.obolibrary.org/obo/clo.owl
- License
- CC BY 4.0
- Homepage
- https://github.com/CLO-Ontology/CLO
- Contact
- Jie Zheng
- 0000-0002-2999-0103
- @zhengj2007
- Tracker
- https://github.com/CLO-Ontology/CLO/issues
- Domain
- anatomy and development
- Dependencies
- cl
- doid
- ncbitaxon
- uberon
- Stars
-
- Contributors
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- Last Commit
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- OBO Dashboard
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