A collection of OBO Foundry related mailing lists and trackers

Mailing Lists


go-development (biological_process) (cellular_component) (molecular_function)
Description: Anything having to do with development, especially the core of "generic" developmental processes.
Traffic: N/A
obo-crossproducts
Description: domain discussion on linking OBO ontologies
Traffic: low
obo-taxonomy (teleost_taxonomy) (teleost_anatomy) (ncbi_taxonomy)
Description: Discussion of ontological representation of alpha taxonomies and phylogenies
Traffic: N/A
pombase-phenotype (fypo)
Description: domain discussion on Fission Yeast Phenotype ontology (FYPO)
Traffic: low
obo-diffs
Description: all changes to all registered obo files are posted here (obodiff format)
Traffic: N/A
obo-arthropod-anatomy (fly_anatomy) (hymenoptera_anatomy) (spider_anatomy) (tick_anatomy) (mosquito_anatomy)
Description: domain discussion on arthropod anatomy ontologies
Traffic: N/A
obo-human-phenotype (human_phenotype) (mouse_pathology)
Description: domain discussion
Traffic: low
go-neurobiology (biological_process) (cellular_component) (molecular_function)
Description: Anything relevant to neurobiology or the nervous system, including neuron development.
Traffic: N/A
obo-teleost-discuss (teleost_anatomy) (zebrafish_anatomy)
Description: anatomy and taxonomy of teleost fish
Traffic: medium
obo-behavior (neuro_behavior_ontology)
Description: discussion list for creation of behavior ontology or ontologies within OBO framework
Traffic: N/A
information-ontology (information_artifact)
Description: domain discussion for Information Artifact Ontology
Traffic: medium
obo-phenotype (quality) (mammalian_phenotype) (plant_trait) (evoc)
Description: domain discussion
Traffic: medium
song-devel (sequence)
Description: N/A
Traffic: medium
go-cellcyle (biological_process) (cellular_component) (molecular_function)
Description: All processes involved in the cell cycle or in chromosome segregation.
Traffic: N/A
obo-relations (relationship)
Description: domain discussion for OBO Relation Ontology
Traffic: medium
obo-format
Description: syntax and semantics of OBO Format
Traffic: medium
diseaseontology-discussion
Description: N/A
Traffic: low
obo-pong (plant_ontology)
Description: cross-products within plant ontology
Traffic: low
obo-mouse-strain
Description: discussion for mouse strain ontology
Traffic: medium
go-interests (biological_process) (cellular_component) (molecular_function)
Description: Various GO special interest lists
Traffic: N/A
go-pathogenesis (biological_process) (cellular_component) (molecular_function)
Description: Anything involving pathogens, including viruses, from any of the ontologies.
Traffic: N/A
ido (infectious_disease_ontology)
Description: N/A
Traffic: N/A
chebi-ontology (chebi)
Description: N/A
Traffic: N/A
obo-foundry
Description: domain discussion on OBO Foundry
Traffic: low
ogms-discuss (OGMS)
Description: domain discussion for OGMS
Traffic: medium
pro-obo
Description: domain discussion for Protein Ontology (PRO)
Traffic: medium
go-metabolism (biological_process) (cellular_component) (molecular_function)
Description: Biosynthesis, catabolism and cell biochemistry.
Traffic: N/A
obo-envo (envo) (plant_environment)
Description: domain discussion
Traffic: low
obi-devel (obi)
Description: domain discussion on OBI
Traffic: high
obo-discuss
Description: all of OBO
Traffic: medium
go (biological_process) (cellular_component) (molecular_function)
Description: closed publically viewable list for the GO Consortium
Traffic: high
go-friends (biological_process) (cellular_component) (molecular_function)
Description: open announcement and discussion list for GO consortium
Traffic: medium
obo-unit
Description: domain discussion on OBO Unit ontology (part of PATO)
Traffic: low
obo-vertebrate-anatomy
Description: discussion of vertebrate anatomy ontology
Traffic: medium
go-diffs (biological_process) (cellular_component) (molecular_function)
Description: all changes to GO are posted here (obodiff format)
Traffic: N/A
po-announce (plant_ontology)
Description: N/A
Traffic: N/A
cdao-discuss (cdao)
Description: N/A
Traffic: N/A
bfo-discuss (bfo)
Description: N/A
Traffic: low
obo-cell-type (cell)
Description: domain discussion for OBO Cell Ontology
Traffic: medium
po-dev (plant_ontology)
Description: N/A
Traffic: N/A
obo-phenotype-commits (quality) (mammalian_phenotype)
Description: all changes to obo files in the phenotype domain are posted here (cvsdiff format)
Traffic: N/A


Trackers


BCGO (BCGO)
Name: bcgo-issues
Description: All requests regarding the BCGO Ontology
GAZ (gazetteer)
Name: gaz-requests
Description: Environmental Gazetteer (GAZ) requests
DINTO (DINTO)
Name: dinto-issues
Description: All requests regarding the DINTO Ontology
DRON (DRON)
Name: dron-issues
Description: All requests regarding the Drug ontology
OBO_REL (relationship)
Name: obo-relation-requests
Description: All requests regarding relations for OBO
MOP (MOP)
Name: mop-issues
Description: All requests regarding the MOP Ontology
UBERON (uberon)
Name: uberon-requests
Description: Uber-anatomy ontology (UBERON) requests
VO (vaccine)
Name: obo-vaccine-ontology-requests
Description: All requests regarding the Vaccine Ontology (VO)
MAMO (mamo)
Name: mamo-tracker
Description: Mathematical modeling ontology tracker
IDO (infectious_disease_ontology)
Name: infectous-disease-ontology-requests
Description: Infectious Disease Ontology (IDO) requests
CVDO (CVDO)
Name: cvdo-issues
Description: All requests regarding the Cardiovascular Disease Ontology
BSPO (spatial)
Name: obo-spatial-requests
Description: All requests for the Spatial Ontology (BSPO) route to the CARO tracker
DDANAT (dictyostelium_discoideum_anatomy)
Name: obo-dicty-anatomy-requests
Description: Dictyostelium anatomy ontology term requests
PCO (PCO)
Name: pco-issues
Description: All requests regarding the PCO Ontology
CARO (caro)
Name: obo-caro-requests
Description: All requests for the Common Anatomy Reference Ontology (CARO)
PATO (quality)
Name: obo-pato-requests
Description: All requests for PATO, the ontology of biological qualities; this includes phenotypic qualities, qualities of the environment. If your request is regarding phenotypic terms and you are unsure of which tracker to use, use this one. Requests pertaining to pre-coordinated plant phenotypes should go to @obo-trait-ontology-requests@.
PR (protein)
Name: obo-protein-ontology-requests
Description: All requests regarding PRO, the Protein Ontology
FYPO (fypo)
Name: fypo-requests
Description: All requests regarding FYPO, the Fission Yeast Phenotype Ontology
GO (biological_process) (cellular_component) (molecular_function)
Name: geneontology-Curator-requests
Description: All requests for the Gene Ontology
ZFA (zebrafish_anatomy)
Name: obo-zebrafish-anatomy-ontology-requests
Description: Zebrafish Anatomy (ZFA) term requests
CL (cell)
Name: obo-Cell-ontology-requests
Description: All requests for the OBO-Cell ontology
FBbt (fly_anatomy)
Name: FlyBase-fly-anatomy-requests
Description: Drosophila anatomy term requests
OVAE (ovae)
Name: ovae-tracker
Description: A biomedical ontology in the domain of vaccine adverse events. OVAE is an extension of the Ontology of Adverse Event (OAE) and uses the vaccine information imported from the Vaccine Ontology (VO).
CHEBI (chebi)
Name: obo-chebi-curator-requests
Description: All requests for the ChEBI, chemical entities of biological interest
HP (human_phenotype)
Name: obo-human_phenotype-ontology-requests
Description: All requests regarding HP, the Human Phenotype Ontology
VTO (VTO)
Name: vto-issues
Description: All requests regarding the VTO Ontology
VSAO (vertebrate_skeletal_anatomy)
Name: obo-vao-requests
Description: All requests regarding the Vertebrate Anatomy Ontology (VSAO)
CHMO (CHMO)
Name: chmo-issues
Description: All requests regarding the chemical methods ontology
MA (adult_mouse_anatomy)
Name: obo-mouse-anatomy-ontology-requests
Description: All requests regarding MA, the Mouse Anatomy Ontology
MF (MF)
Name: mf-issues
Description: All requests regarding the Mental Functioning Ontology
OBI (obi)
Name: obi-requests
Description: Ontology for Biomedical Investigations (OBI) term requests
FMA (fma_lite)
Name: obo-fma-requests
Description: Foundational Model of Anatomy (FMA) term requests
OPL (opl)
Name: opl-issues
Description: All requests regarding relations for OPL
SBO (systems_biology)
Name: systems-biology-ontology-requests
Description: Systems biology ontology requests
TO (plant_trait)
Name: obo-trait-ontology-requests
Description: All requests regarding plant phenotypic trait terms. See also @obo-pato-requests@
FuGO
Name: fugo-requests
Description: FuGO term requests (now obsolete?
STATO (STATO)
Name: stato-issues
Description: All requests regarding the STATO Ontology
XAO (xenopus_anatomy)
Name: xao-requests
Description: Xenopus Anatomy Ontology (XAO) requests
OBIB (OBIB)
Name: obib-issues
Description: All requests regarding the OBIB Ontology
ENVO (envo)
Name: obo-environment-ontology-requests
Description: All requests regarding the OBO Environment Ontology (new)
BCO (BCO)
Name: bco-issues
Description: All requests regarding the BCO Ontology
OBCS (OBCS)
Name: obcs-issues
Description: All requests regarding the OBCS Ontology
PORO (poro)
Name: porifera-ontology
Description: Porifera Ontology (PORO) requests
MFOEM (MFOEM)
Name: mfoem-issues
Description: All requests regarding the Emotion Ontology
TRANS (transmission)
Name: pathogen-transmission-term-request
Description: This vocabulary describes a process that is the means of how a pathogen is transmitted from one host, reservoir, or source to another host. This transmission may occur either directly or indirectly and may involve animate vectors or inanimate vehicles. Please provide a definition for all new term requests
NBO (neuro_behavior_ontology)
Name: neuro-behavior-ontology
Description: Neuro Behavior Ontology (NBO) requests
GEO (geo)
Name: geo-issues
Description: All requests regarding the GEO Ontology
TTO (teleost_taxonomy)
Name: teleost_taxonomy
Description: Submit requests for new/changes to the teleost taxonomy ontology (new)
FBsp (fly_taxonomy)
Name: FlyBase-fly-taxonomy-requests
Description: Drosophila taxonomy requests
OGI (OGI)
Name: ogi-issues
Description: All requests regarding the OGI Ontology
OGG (OGG)
Name: ogg-issues
Description: All requests regarding the OGG Ontology
DOID (disease_ontology)
Name: obo-disease-requests
Description: All requests for the disease ontology
WBbt (worm_anatomy)
Name: obo-worm-anatomy-ontology-requests
Description: Worm Anatomy (WBbt) term requests
PO (plant_ontology)
Name: obo-plant-ontology-requests
Description: All requests regarding plant anatomical terms
KISAO (kisao)
Name: kisao-requests
Description: Kinetic Simulation Algorithm Ontology term requests
OGSF (OGSF)
Name: ogsf-issues
Description: All requests regarding the OGSF Ontology
CMF (CMF)
Name: cmf-issues
Description: All requests regarding the CMF Ontology
MIAPA (MIAPA)
Name: miapa-issues
Description: All requests regarding the MIAPA Ontology
SO (sequence)
Name: song-term-requests
Description: All requests regarding the Sequence Ontology
FBdv (fly_development)
Name: FlyBase-fly-development-requests
Description: Drosophila term requests
SPD (spider_anatomy)
Name: obo-spider-ontology-requests
Description: Spider Ontology (SPD) term requests
FLU (influenza_ontology)
Name: FLU-requests
Description: Influenze Ontology (FLU) requests
AAO (amphibian_anatomy)
Name: aao-issues
Description: AAO requests
OGMS (OGMS)
Name: OGMS-requests
Description: Ontology of General Medical Science (OGMS) requests
TAO (teleost_anatomy)
Name: obo-teleost-anatomy-ontology-requests
Description: Teleost multi-species Anatomy (TAO) term requests
ICO (ICO)
Name: ico-issues
Description: All requests regarding the ICO Ontology
MFOMD (MFOMD)
Name: mfomd-issues
Description: All requests regarding the MFOMD Ontology
IAO (information_artifact)
Name: information-artifact-ontology
Description: Information Artifact Ontology (IAO) requests
IRIDA
Name: irida-issues
Description: All requests regarding the IRIDA Ontology
ERO (ero)
Name: ero-issues
Description: All requests regarding relations for ERO
RXNO (RXNO)
Name: rxno-issues
Description: All requests regarding the RXNO Ontology
MP (mammalian_phenotype)
Name: obo-mammalian_phenotype-ontology-requests
Description: All requests regarding MP, the Mammalian Phenotype Ontology